Assessing the influence of resource covariates at multiple spatial scales: an application to forest-dwelling caribou faced with intensive human activity

Efforts in isolating the relative effects of resources and disturbances on animal-distribution patterns remain hindered by the difficulty of accounting for multiple scales of resource selection by animals with seasonally dynamic drivers. We developed multi-scale, seasonal models to explore how local resource selection by the threatened forest-dwelling woodland caribou (Rangifer tarandus caribou) was influenced by both broad-scale landscape context and local resource heterogeneity in the intensively managed region of Charlevoix, Québec, Canada, located on the southern border of the North American caribou range. We estimated resource selection functions using 23 GPS-collared caribou monitored from 2004 to 2006 and landscape data on vegetation classes, terrain conditions, and roads. We found evidence of thresholds in road “proximity” effects (up to 1.25 km), which underscores the importance of including landscape context variables in addition to locally measured variables, and of fitting seasonal-specific models given temporal variation in the magnitude of selection and optimal scale of measurement. Open lichen woodlands were an important cover type for caribou during winter and spring, whereas deciduous forests, wetlands, and even young disturbed stands became important during calving and summer. Caribou consistently avoided roads and rugged terrain conditions at both local and landscape levels. Landscape context fundamentally constrains the choices available to animals, and we showed that failing to consider landscape context, or arbitrarily choosing an inappropriate scale for measuring covariates, may provide biased inferences with respect to habitat selection patterns. Effective habitat management for rare or declining species should carefully consider the hierarchical nature of habitat selection.     

Über das intramurale Blutgefäßsystem des Dickdarms der Säuger—Eine Literatur-Studie *

As in other studied species the exclusively on the epithelial side existing ‘fenestrated endothelium’ of the pericryptal and subepithelial capillaries is doubtless the most important structural mark of the large intestinal function, too. Moreover, the direction of the mucosal capillary blood flow informs, that at first the release of the essential substances for the glandular secretion will take place, before epithelial transports concerning the resorption occur. As for the hemodynamic regulatory structures in the wall of the blood-vessels there are obviously differences in their existence depending on the species, respectively they are completely absent such as in the ruminants. Finally, it should be mentioned, that arterio-venous anastomoses could not be detected.     

Kapillarkonvolute an der Pleura parietalis der Ziege (Capra aegagrus hircus)

The aim of the present study was to describe the morphology and location of convoluted capillaries of the pleura in the goat. Seven adult male and female goats were (1) fixed by perfusion with formaldehyde or (2) perfused with Indian ink and postfixed in formaldehyde. The parietal pleura was studied systematically for the presence of convoluted capillaries; areas containing such formations were dissected out, counterstained and examined light microscopically. The convoluted capillaries occur (1) within the normal level of the vascular bed, or (2) in villous elevations. The presence of convoluted capillaries is discussed in correlation with the functional studies of Lang (1965).     

Microbial community development and unseen diversity recovery in inoculated sterile soil

Soil is considered as one of the most biodiverse environments on Earth; yet, the taxonomy, occurrence, and role of its different microbial populations are largely unknown. Here, two sterilized soils (from England and Italy) were inoculated with a subsample of their initial microbial communities and/or those from the other soil to study their microbial community evolution. This approach compared two driving factors (original community and soil physico-chemical characteristics) for microbial community definition. After 2 months of incubation and based on metagenomic datasets, the two inoculated communities (from an English grassland and an Italian forest) possessed similar functional and taxonomical structures when inoculated in the same sterile soil. For example, the newly colonized Italian soil was dominated by Actinobacteria related organisms (>66 % of the detected community) with a functional distribution independent of the inoculated soil origin. In addition, some of the organisms that dominated the different inoculated communities after 2 months were similar for a given sterile soil whether they came from the English grassland or the Italian forest, and they had not been detected in the original microbial community from either soil. Thus, similar microorganisms with low representation from the two distinct communities emerged in each sterilized soil, thus increasing the microbial diversity recovered from the microbial community of the donor soil. So far, these observations support the idea that different temperate soil microbial communities have different evenness due to environmental physico-chemical variations, yet have similar community composition (richness), and thus develop similarly when colonizing the same habitat.     

Changes of pore morphology, infiltration and earthworm community in a loamy soil under different agricultural managements

Earthworm activity produces changes at different scales of soil porosity, including the mesoporosity (between 1.000 and 30 μm eq. dia.) where both water retention and near-saturated infiltration take place. At this scale, the structural changes are poorly described in temperate agricultural systems, so we do not yet fully understand how these changes occur. The present study was conducted to determine the relationships between the morphology of the mesopores, which is mainly affected by earthworm activity, and the hydrodynamic behaviour (near-saturated infiltration) of topsoil under different agricultural managements inducing a large range of earthworm populations.Investigations were carried out at the soil surface in three fields under different management practices giving rise to three different earthworm populations: a continuous maize field where pig slurry was applied, a rye-grass/maize rotation (3/1 year, respectively) also with pig slurry, and an old pasture sown with white clover and rye-grass.Pore space was quantified using a morphological approach and 2D image analysis. Undisturbed soil samples were impregnated with polyester resin containing fluorescent pigment. The images were taken under UV light, yielding a spatial resolution of 42 μm pixel⁻¹. Pores were classified according to their size (which is a function of their area) and their shape. Hydraulic conductivity K(h) was measured using a disc infiltrometer at four water potentials: −0.05, −0.2, −0.6, and −1.5 kPa. The abundance and ecological categories groups of earthworms were also investigated.Continuous soil tillage causes a decrease in both abundance and functional diversity (cf. maize compared with old pasture) when soil tillage every 4 years causes only a decrease in abundance (cf. rotation compared with old pasture). There were no relationships between total porosity and effective porosity at h=−0.05 kPa. Image analysis was useful in distinguishing the functional difference between the three managements. Fewer roots and anecic earthworms resulted in fewer effective tubular voids under maize. There were fewer packing voids in the old pasture due to cattle trampling. Greater hydraulic conductivity in the pasture phase of rotation may arise from a greater functional diversity than in the maize and absence of cattle trampling compared with the pasture. We point to some significant differences between the three types of agricultural management.A better understanding is required of the influence of agricultural management systems on pore morphology. This study provides a new methodology in which we consider the earthworm activity as well as community in order to assess the effects of agricultural management on soil structure and water movement.     

IMAGING DIAGNOSIS—AORTIC ANEURYSM AND URETERAL OBSTRUCTION SECONDARY TO UMBILICAL ARTERY ABSCESSATION IN A 5‐WEEK‐OLD FOAL

A 5‐week‐old foal was evaluated for fever and hematuria of 3 days duration. Cystoscopy localized the blood to be originating from the left ureter. Abdominal ultrasonography revealed left hydronephrosis, hydroureter, and omphaloarteritis of the left umbilical artery with abscess formation that communicated with an arterial structure. Computed tomography (CT) revealed a large aortic aneurysm within the center of the abscess. An exploratory celiotomy was performed and the infection was nonresectable. The prognosis for life was grave; therefore the colt was euthanized. Necropsy findings confirmed the antemortem diagnosis. Ultrasound and CT imaging in this case provided an accurate antemortem diagnosis.     

Factors controlling nitrate concentrations in surface waters of an artificially drained agricultural watershed

Land managers need to clearly identify the main natural factors controlling nitrate attenuation from upstream to downstream in agricultural watersheds. All interfaces between surface waters and groundwaters such as riparian zones could be identified as retention zones in the watershed. However, in highly human-influenced agricultural landscapes, retention zones could be shortcut, abandoned and sometimes erased. Starting from this situation, this paper aims to underline the role of hydrological and biogeochemical retention processes in the determination of nitrate concentration in an artificially drained agricultural watershed. The Orgeval watershed (East part of Paris, France, belonging to a long-term environmental observatory network) is 80 % covered by drained agricultural plots, 17 % forest and 3 % urban areas and roads, covering a surface area of 104 km². The watershed is split into several nested sub-basins from 1 to 100 km². Two levels of monitoring were carried out in the 2007–2008 hydrological year: long-term at six monitoring stations (measuring nitrate concentration and discharge) and 20 points throughout the watershed (measuring discharge, chloride, nitrate, sulphate, calcium concentration and nitrogen isotopic composition) for three different dates (10/18/2007, 01/23/2008, 04/10/2008). Artificial drainage generates modified water transfer and thus nitrate transformation processes during the wet drainage season in winter. Dilution processes provided by forested areas seem to be one of the main factor determining global water quality. A threshold of 34 % forested cover maintains the nitrate concentration below the drinking-water limit (11.3 mgN L^?1). Nevertheless, statistical analysis, isotopic measurements and the analysis of the nitrate versus chloride ratio showed that retention processes also influence water quality during the dry season.     

Assessing the effects of subtropical forest fragmentation on leaf nitrogen distribution using remote sensing data

Subtropical forest loss resulting from conversion of forest to other land-cover types such as grassland, secondary forest, subsistence crop farms and small forest patches affects leaf nitrogen (N) stocks in the landscape. This study explores the utility of new remote sensing tools to model the spatial distribution of leaf N concentration in a forested landscape undergoing deforestation in KwaZulu-Natal, South Africa. Leaf N was mapped using models developed from RapidEye imagery; a relatively new space-borne multispectral sensor. RapidEye consists of five spectral bands in the visible to near infra-red (NIR) and has a spatial resolution of 5 m. MERIS terrestrial chlorophyll index derived from the RapidEye explained 50 % of the variance in leaf N across different land-cover types with a model standard error of prediction of 29 % (i.e. of the observed mean leaf N) when assessed on an independent test data. The results showed that indigenous forest fragmentation leads to significant losses in leaf N as most of the land-cover types (e.g. grasslands and subsistence farmlands) resulting from forest degradation showed lower leaf N when compared to the original indigenous forest. Further analysis of the spatial variation of leaf N revealed an autocorrelation distance of about 50 m for leaf N in the fragmented landscape, a scale corresponding to the average dimension of subsistence fields (2,781 m²) in the region. The availability of new multispectral sensors such as RapidEye thus, moves remote sensing closer to widespread monitoring of the effect of tropical forest degradation on leaf N distribution.